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EOT internal To Do List Prepare for SC make a copy of the lab URL contents in a few places, including the workshopN servers, in case we loose contact with the ...
(Image copyright Ann Althouse, licensed under Creative Commons, http://www.flickr.com/photos/althouse/141467660/) OSG User School 2017 Could you transform your research ...
2017 OSG User School Materials Monday Morning: Introduction to HTC Lecture: Introduction to HTC (PDF) Exercise 1.1: Log in to the local submit machine and ...
OSG User School 2017 Final Assignment The School focused on using high throughput computing (HTC) to support and transform scientific inquiry. Your final assignment ...
Travel To and From Madison Whether we offered to pay your travel costs or not, please make sure that we get a copy of your travel plans so that we know when to expect ...
Getting Reimbursed for Expenses If you paid for certain expenses to attend the OSG User School 2017, then we will reimburse you for them. This page explains what can ...
pre em { font style: normal; background color: yellow; } pre strong { font style: normal; font weight: bold; color: #008; } Friday Exercise 1.3: Execute a Production ...
pre em { font style: normal; background color: yellow; } pre strong { font style: normal; font weight: bold; color: #008; } Friday Exercise 1.2: Plan Joe's Workflow ...
pre em { font style: normal; background color: yellow; } pre strong { font style: normal; font weight: bold; color: #008; } Friday Exercise 1.1: Learn about Joe's ...
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Thursday Exercise 3.2: Using StashCache for Large Shared Data This exercise will use a BLAST workflow to demonstrate the functionality of StashCache for transferring ...
!Thursday Exercise 1.2: Do the OSG Connect Quickstart For this exercise, you can also follow the online guide from the OSG Connect helpdesk that will acquaint you ...
Thursday Exercise 1.1: Getting Acquainted with OSG Connect In this exercise, you'll get acquainted with the OSG Connect submit server (user training.osgconnect.net ...
Thursday Exercise 1.4: Try Singularity on the OSG (Optional) In this tutorial, we see how to submit a tensorflow (https://www.tensorflow.org/) job on the OSG through ...
Thursday Exercise 4.2: Large Output Data In this exercise, we will run a job that produces a very large output file, based on a few parameters. This exercise should ...
Thursday Exercise 4.1: Large Input Data In this exercise, we will do a similar version of the previous exercise. This exercise should take 10 15 minutes. Background ...
Thursday Exercise 3.3: Using Stash for unique large input In this exercise, we will run a multimedia program that converts and manipulates video files. In particular ...
Thursday Exercise 3.1: Using a Web Proxy for Large Shared Input Continuing the series of exercises blasting mouse genetic sequences, the objective of this exercise ...
Thursday Exercise 2.3: Splitting Large Input for Better Throughput The objective of this exercise is to prepare for blasting a much larger input query file by splitting ...
Thursday Exercise 1.3: Try an OSG Connect Software Module In this exercise, you'll use a software package called GROMACS that was already installed on OASIS. GROMACS ...
pre em { font style: normal; background color: yellow; } pre strong { font style: normal; font weight: bold; color: #008; } Wednesday Exercise 1.7: Using Python, ...
pre em { font style: normal; background color: yellow; } pre strong { font style: normal; font weight: bold; color: #008; } Wednesday Exercise 1.4: Pre packaging ...
pre em { font style: normal; background color: yellow; } pre strong { font style: normal; font weight: bold; color: #008; } Friday Exercise 1.4: Workflow Optimization ...
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Tuesday Exercise 1.3: Running jobs in the OSG The goal of this exercise is to have your jobs running on the OSG and map their geographical locations. Where in the ...
Tuesday Exercise 2.1: Hardware Differences in the OSG The goal of this exercise is to compare hardware differences between our local cluster (CHTC here at UW–Madison ...
pre em { font style: normal; background color: yellow; } pre strong { font style: normal; font weight: bold; color: #008; } Wednesday Exercise 1.9: Using Docker In ...
Tuesday Exercise 1.2: Log in to the OSG Submit Machine The goal of this exercise is to log on to a different submit host so that you can start submitting jobs into ...
pre em { font style: normal; background color: yellow; } pre strong { font style: normal; font weight: bold; color: #008; } Wednesday Exercise 1.6: Matlab The goal ...
pre em { font style: normal; background color: yellow; } pre strong { font style: normal; font weight: bold; color: #008; } Bonus: Passing Arguments Through the Wrapper ...
pre em { font style: normal; background color: yellow; } pre strong { font style: normal; font weight: bold; color: #008; } Wednesday Exercise 1.3: Using Wrapper ...
pre em { font style: normal; background color: yellow; } pre strong { font style: normal; font weight: bold; color: #008; } Wednesday Exercise 1.2: Using a Pre compiled ...
Tuesday Exercise 1.1: Refresher Submitting Multiple Jobs The goal of this exercise is to map the physical locations of some worker nodes in our local cluster. To ...
pre em { font style: normal; background color: yellow; } pre strong { font style: normal; font weight: bold; color: #008; } File Compression and Testing Resource ...
a pre em { font style: normal; background color: yellow; } pre strong { font style: normal; font weight: bold; color: #008; } Monday Exercise 3.4: A More Complex ...
pre em { font style: normal; background color: yellow; } pre strong { font style: normal; font weight: bold; color: #008; } Monday Exercise 2.5: Submit With queue ...
Challenge 1 Do you have any extra computation that needs to be done? Real work, from your life outside this summer school? If so, try it out on our HTCondor pool. ...
pre em { font style: normal; background color: yellow; } pre strong { font style: normal; font weight: bold; color: #008; } Monday Exercise 2.4: Use queue N , $ ...
pre em { font style: normal; background color: yellow; } pre strong { font style: normal; font weight: bold; color: #008; } Monday Exercise 3.1: Retries The goal ...
pre em { font style: normal; background color: yellow; } pre strong { font style: normal; font weight: bold; color: #008; } Monday Exercise 2.1: Explore condor q ...
Tuesday Exercise 1.4: Submitting Older Jobs Remotely The goal of this exercise is to submit a job from one of Monday's exercises so that it runs in the OSG. If you ...
Tuesday Exercise 3.1: Troubleshooting a DAG The goal of this exercise is to troubleshoot some common problems that you may encounter when submitting a DAG using HTCondor ...
Understanding Data Requirements Background This exercise's goal is to learn to think critically about an application's data needs, especially before submitting a ...
Handling a DAG That Fails The objective of this exercise is to help you learn how DAGMan deals with job failures. DAGMan is built to help you recover from such failures ...
pre em { font style: normal; background color: yellow; } pre strong { font style: normal; font weight: bold; color: #008; } Monday Exercise 3.2: A Brief Detour Through ...
Composing Larger DAGs From Simpler DAGs With SPLICE The objective of this exercise is to show how to build up sophisticated DAGs built from smaller DAG files without ...
Simpler DAGs with variable substitutions The objective of this exercise is to help you write simpler DAGs by using variable substitutions in your submit files. If ...
pre em { font style: normal; background color: yellow; } pre strong { font style: normal; font weight: bold; color: #008; } Monday Exercise 3.3: Coordinating a Set ...
pre em { font style: normal; background color: yellow; } pre strong { font style: normal; font weight: bold; color: #008; } Monday Exercise 2.2: Explore condor status ...
pre em { font style: normal; background color: yellow; } pre strong { font style: normal; font weight: bold; color: #008; } Monday Exercise 1.5: Declare Resource ...
Number of topics: 50

Topic revision: r1 - 16 Aug 2001 - 19:58:33 - PeterThoeny?
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